Weba wrapper around the bioconductor/VariantAnnotation package, providing functions tailored to GWAS VCF for reading, querying, creating and writing GWAS VCF format files. some … Issues 10 - GitHub - MRCIEU/gwasvcf: Reading, querying and writing GWAS … Pull requests 1 - GitHub - MRCIEU/gwasvcf: Reading, querying … Actions - GitHub - MRCIEU/gwasvcf: Reading, querying and writing GWAS … GitHub is where people build software. More than 83 million people use GitHub … GitHub is where people build software. More than 94 million people use GitHub … Insights - GitHub - MRCIEU/gwasvcf: Reading, querying and writing GWAS … 113 Commits - GitHub - MRCIEU/gwasvcf: Reading, querying and writing GWAS … Tag - GitHub - MRCIEU/gwasvcf: Reading, querying and writing GWAS summary ... WebContribute to MRCIEU/gwasvcf development by creating an account on GitHub. You signed in with another tab or window. Reload to refresh your session. You signed out in another tab or window.
gwasvcf/DESCRIPTION at master · MRCIEU/gwasvcf · GitHub
WebWe developed a format for storing and harmonising GWAS summary data known as GWAS VCF format. This format is effective for being very fast when querying chromosome and position ranges, handling multiallelic variants and indels. All the data in the IEU GWAS database is available for download in the GWAS VCF format. WebFeb 4, 2024 · when I use this function query_gwas(gwasvcf,rsid = RSID,proxies = "yes",bfile = bf),type = "outcome") ,I get error Find LD proxies as follow: Finding proxies... the latin american subaltern studies reader
File Finder · GitHub
WebGWAS-VCF Python parser. The package provides a thin wrapper around pysam and rsidx to parse VCF files containing GWAS summary statistics and trait metadata. See also gwasvcf an R package for parsing GWAS … Webgwasvcf /.github / workflows / R-CMD-check.yaml View runs Go to file View runs; Go to file T; Go to line L; Copy path Copy permalink; This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository. Cannot retrieve contributors at this time. WebNov 15, 2024 · gwasvcf_to_coloc. #3. Open. explodecomputer opened this issue on Nov 15, 2024 · 0 comments. thyroid raw